Protein Alignment ind and repo

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Alignment Length: 355
• Identity: 91/355 - (25%)
• Similarity: 132/355 - (37%)
• Gaps: 99/355 - (27%)

  Fly    25 GSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS--YLFSLGIQQQQQQQQQQQQHAAAAAAAAA 87
            |..||||.         .:..:..:.....|..|  |.:....|:..:||||||.|.
  Fly    76 GGAGGSPN---------YVTKLDFVNKMGCYSPSQKYEYISAPQKLVEQQQQQQHHH-------- 123

  Fly    88 AAAALQQHPHVSSSP-----GSLYHPYA--QLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLP- 144
                 |.|.|.:::|     |.|.|..:  |....:::..|..:|.........|::|..|..|
  Fly   124 -----QHHQHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQ 183

  Fly   145 PIHNLYG--------------------SPVV-----GGLPLPEPGSFCT---------SPSASSS 175
            .:.:|||                    |||:     .|..|.:|...|:         :|.:|||
  Fly   184 QLQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSS 248

  Fly   176 ASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSS-----------KR 229
            ..::.|.|     |....:.||.:.........::||..  .|.......||           |:
  Fly   249 TVVNGTTN-----GTGNANSSSSAGVGIQGAAGTAGGVA--APAAKKDGSSSKKKGDPNGIKKKK 306

  Fly   230 IRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK---------- 284
            .||.||:.||.||||.|....|.....|.|:|.:|.|||.:|::||||||.|.:|
  Fly   307 TRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYI 371

  Fly   285 GGSESPTFNLSTNS-----NGSPQASPVSP 309
            ..|..||..|:..:     ...||.:.|:|
  Fly   372 KTSTPPTATLNPGTLAPPFTSYPQTTTVTP 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	28/55 (51%)
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	23/47 (49%)