Protein Alignment ind and gsx1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Alignment Length: 340
• Identity: 108/340 - (31%)
• Similarity: 130/340 - (38%)
• Gaps: 142/340 - (41%)

  Fly     1 MSRSFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGI 65
            |.||||:|||:     |.:..||  ....||               |:.||
Zfish     1 MPRSFLVDSLI-----LRENSEK--GTENSP---------------PLFPY-------------- 29

  Fly    66 QQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCY- 129
                                    |....||..|.|.||.:...|.|.              |:
Zfish    30 ------------------------AVHPSHPLHSLSAGSCHSRKAGLL--------------CFC 56

  Fly   130 ---------PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSP-----SASSSASLD- 179
                     ||||        .||.|...:  |..|       ..:|.|.     |.||..:|:
Zfish    57 PLCVTSQLHPSPP--------ALPLIKASF--PAFG-------TQYCHSALSRQHSTSSGVNLNS 104

  Fly   180 ----YTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLL 240
                |...:..|..::| |..|...:||.|:                   ||||:||||||||||
Zfish   105 GSGLYQAAYPVPDPRQF-HCISIENSSSQLQ-------------------SSKRMRTAFTSTQLL 149

  Fly   241 ELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK----GGSESPTFNLSTNSN-G 300
            ||||||:.|.|||||||||||..|.||||||||||||||||.||    |...:...|...:|: .
Zfish   150 ELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKSGSHRTGAHNCKCSSSLS 214

  Fly   301 SPQAS------PVSP 309
            |.:.|      |:||
Zfish   215 SARCSEEEDDLPMSP 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	47/55 (85%)
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	47/55 (85%)