Protein Alignment ind and hoxc8a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001005771.1
• Gene: hoxc8a / 449648
• ZFINID: ZDB-GENE-990415-114
• Length: 250
• Species: Danio rerio
• Alignment Length: 246
• Identity: 74/246 - (30%)
• Similarity: 97/246 - (39%)
• Gaps: 79/246 - (32%)

  Fly    51 YPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHP--HVS----------SSPG 103
            :|.|...|:....|             |.|||...        |||  ||.          |:||
Zfish    28 FPQSVARSHTLVYG-------------HGAAAPGF--------QHPSHHVQDFFHHGTTGISNPG 71

  Fly   104 SLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCT 168
            ...:|.|  .|....::.|..|| ..|..|               |||:        .:..:...
Zfish    72 YQQNPCA--LACHGDATKFYGYE-ALPRQP---------------LYGT--------QQEATLAQ 110

  Fly   169 SPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTA 233
            .|...||.|    .|..|.||       ..|.||||..         :.|.:..:|...:..|..
Zfish   111 YPDCKSSNS----TNPGEGQG-------HLSQNSSPSL---------MFPWMRPHAPGRRNGRQT 155

  Fly   234 FTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            ::..|.||||:||..|.||:|.||||:::.|.|:|:||||||||||:|.||
Zfish   156 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKK 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	30/55 (55%)
hoxc8a	NP_001005771.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	112..152		15/59 (25%)
		Antp-type hexapeptide. /evidence=ECO:0000255	138..143		1/4 (25%)
		Homeodomain	150..206	CDD:459649	30/55 (55%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..250		1/1 (100%)