DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and zfh1

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:421 Identity:86/421 - (20%)
Similarity:142/421 - (33%) Gaps:161/421 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSDRPNLSQKKEKLGSPGGSPTAAA------AVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQ 69
            |::...|.::.||  |||.:.:|:.      ........||:|.||:|.||..|           
  Fly   414 LNNNRALLKRLEK--SPGSASSASRRSPSDHGKGKLPEQPSLPGLPHPMSYFAS----------- 465

  Fly    70 QQQQQQQQHAAAAAAAAA------AAAALQQHPH--VSSSPG--SLYHPYA-----QLFASKRKS 119
               ..|.|..:||.|...      ..|||...||  ::::.|  ...|||:     ||.|:.::.
  Fly   466 ---DAQVQGGSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDPRVHPYSIQRLLQLSAAGQQQ 527

  Fly   120 SGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSP----VVGGLPLPEPGSFCTSPSASSSASLDY 180
            ......|              ||....|:...:|    :|..:..||......:|.|:.:|:   
  Fly   528 REEEREE--------------QQKQQQHDEEETPDEPKLVMDIEEPETKEMAPTPEATEAAT--- 575

  Fly   181 TNNFDEPQGKRFKHESSCSPNS----------------------SPLKNHSSGGPVE-------- 215
                  |..:....|:|..|.|                      :|::.|:   |||        
  Fly   576 ------PIKREESREASPDPESYRSSSQAIKQEQEPLNVAEERQTPVEEHA---PVEHAADLRCS 631

  Fly   216 ------------------ITPLIND---------------YADSSK------------------- 228
                              :..||.:               .|.:|:                   
  Fly   632 RCSKQFNHPTELVQHEKVLCGLIKEELEQHFQQQQATSFALASASEEDEEDEEMDVEEEPRQESG 696

  Fly   229 ----RIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK----- 284
                |:|||....|..:|::.:|.||..||.....||.||:|..:.|::||||.|.:::|     
  Fly   697 ERKVRVRTAINEEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKMQSFQ 761

  Fly   285 ---GGSESPTFNLSTNSNGSPQASPVSPQVK 312
               ....:|...:.:.::.:.:..|:...||
  Fly   762 NNQAAGAAPPMPIDSQASLTREDQPLDLSVK 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 22/78 (28%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 22/54 (41%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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