Protein Alignment ind and C15

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Alignment Length: 281
• Identity: 63/281 - (22%)
• Similarity: 98/281 - (34%)
• Gaps: 115/281 - (40%)

  Fly    64 GIQQQQQQQQQQQQHAAA-------AAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSG 121
            |.:.::::..||:.|..|       |.:...:||||..:||:
  Fly   114 GEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHL----------------------- 155

  Fly   122 FSNYEGCYPS---------PPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSAS 177
                   |||         || ...|.:..|||:|:                           |:
  Fly   156 -------YPSAAGGHVLRVPP-QRTPLTWALPPLHH---------------------------AA 185

  Fly   178 LDYTNNFDE-----PQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTST 237
            |.:....|.     |..:|..|         |.:|.        ||      ...|:.||:||..
  Fly   186 LAHQAVKDRLAAAFPIARRIGH---------PYQNR--------TP------PKRKKPRTSFTRI 227

  Fly   238 QLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESP------------ 290
            |:.|||:.|....||:...|..:|..|::::.|||.||||||.|.::..:|..
  Fly   228 QVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLML 292

  Fly   291 TFNLSTNSNG-SPQASPVSPQ 310
            :......|.| :|.::|:..|
  Fly   293 SLQAEAISKGFAPPSAPLGSQ 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)
C15	NP_476873.2	COG5576	<196..315	CDD:227863	38/141 (27%)
		Homeodomain	218..274	CDD:459649	25/55 (45%)