Protein Alignment ind and HHEX

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 341
• Identity: 79/341 - (23%)
• Similarity: 129/341 - (37%)
• Gaps: 107/341 - (31%)

  Fly     4 SFLMDSLLSDRPNLSQKKEKLGSPGGSP---TAAAAVAAAAMLP---------SIPMLPYPASYV 56
            :|.::::|..:.:..:.:.:.|| ..||   ||..|...|..:|         |....|.|:|..
  Fly    11 AFSIENILEQKSSSHRSQSRRGS-SQSPVAVTAGIATPHALAMPKASLATGSSSAAPTPSPSSAT 74

  Fly    57 GSYLFSLGIQQQQQQQQQQQQHAAAA--------AAAAAAAAALQQHPHVSSSPGSLYHPYAQLF 113
            ..|..|              :.||||        ::|..|..:|:.:| :...|.||:  |.|:.
  Fly    75 NIYDLS--------------REAAAAQYAMKSMDSSAVLAPTSLRFNP-IYPDPASLF--YQQVL 122

  Fly   114 ASKRKSSGF-SNYEGCYPSPPLSANPNS---QQLPPIHNLYGSPVVGGLPLPEPGS-----FCTS 169
            ..::..|.| .:::....:...:..|.:   |..|...:..|        .|.|.|     :|.:
  Fly   123 QLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEG--------FPNPASAAAALYCNA 179

  Fly   170 -PSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTA 233
             |:||.     |.:||    |.:.|                 ||.:.
  Fly   180 YPAASF-----YMSNF----GVKRK-----------------GGQIR------------------ 200

  Fly   234 FTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK-------QKKGGSESPT 291
            |||.|...||..|:.:.|||...|..:|.:|:|:::|||.||||||.|       ::...::.|.
  Fly   201 FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPI 265

  Fly   292 FNLSTNSNGSPQASPV 307
            ...:..|..|..:|.|
  Fly   266 AGAAVGSPSSASSSSV 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	24/62 (39%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/68 (35%)