Protein Alignment ind and ems

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 344
• Identity: 90/344 - (26%)
• Similarity: 111/344 - (32%)
• Gaps: 105/344 - (30%)

  Fly    15 PNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHA 79
            |..||       |..|||         :|.|.|....|             ||||||........
  Fly   210 PQSSQ-------PSSSPT---------LLISSPHATPP-------------QQQQQQPPPNYPKP 245

  Fly    80 AAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPP-LSANPNSQQL 143
            |......|....:...|     |..|..|:...........|..........|| ::|.|   :|
  Fly   246 AMMHPGGAGPMMMPGMP-----PAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPP---EL 302

  Fly   144 PPIHN--------------LYGSPVVG---------GLPLPEPGSFCTSPSASSSASLDYTNNFD 185
            ||.||              |....|:|         ||| |....|..:|..:..:...|
  Fly   303 PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLP-PHAAQFMPNPGMARDSYQLY----- 361

  Fly   186 EP-----QGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELERE 245
             |     .|:.|.|....|....|.:                   ..|||||||:.:|||:||..
  Fly   362 -PWLLSRHGRIFPHRFPGSFLVPPFR-------------------KPKRIRTAFSPSQLLKLEHA 406

  Fly   246 FSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK-------KGGSESPTFNLSTNSNGSPQ 303
            |..|.|:....|..:|..|.|||.|||:||||||.|.|       |||......|:...|.....
  Fly   407 FESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGDEDD 471

  Fly   304 ASPVS------PQVKVHEL 316
            ...:.      |..:.|||
  Fly   472 DELIDMEMDECPSDEEHEL 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	32/62 (52%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	31/55 (56%)