Protein Alignment ind and bcd

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 227
• Identity: 57/227 - (25%)
• Similarity: 85/227 - (37%)
• Gaps: 78/227 - (34%)

  Fly    96 PHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQ----QLPPIHNLYGSPVVG 156
            ||..:.|    ||::                  :|.|....:|:.|    ||||   .:.:|
  Fly    16 PHTHTHP----HPHS------------------HPHPHSHPHPHHQHPQLQLPP---QFRNP--- 52

  Fly   157 GLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK-RFKHESSCSPNSSPLKNHSSGGPVEITPLI 220
                                   :...|||..|. .:.:.....||..|..:..   |.|..|
  Fly    53 -----------------------FDLLFDERTGAINYNYIRPYLPNQMPKPDVF---PSEELP-- 89

  Fly   221 NDYADS-----SKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRV 280
                ||     .:|.||.|||:|:.|||:.|....||:..|..:::.:|.|...||||||:|||.
  Fly    90 ----DSLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRR 150

  Fly   281 KQKKGGSESPTFNLSTNSNGSPQASPVSPQVK 312
            :.|        .....:.:.|.:..|:||.:|
  Fly   151 RHK--------IQSDQHKDQSYEGMPLSPGMK 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)