DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and lab

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:396 Identity:109/396 - (27%)
Similarity:145/396 - (36%) Gaps:153/396 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AAVAAAAMLPSI------PMLP---------YPASYVGSY----LFSLGI--------------- 65
            |||..|:..|.:      ||:.         :.....|||    :.|||:               
  Fly   236 AAVLHASYAPGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGN 300

  Fly    66 -------QQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSP---------GSLYHPYAQLFA 114
                   ||.|.||||||.|.........:.||.|||...|.||         |.:..|      
  Fly   301 LANNPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISP------ 359

  Fly   115 SKRKSSGFSNYEGCYPSPPLSANPN-SQQLP-------------------------PIHNLY--- 150
            ....||..|...|.:|:...|.:|| |..:|                         .:|:..   
  Fly   360 GSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNG 424

  Fly   151 -------------------------GSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK 190
                                     |||.:||: |....|...:.||:::.|.       .|.|.
  Fly   425 QLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGV-LSVQNSLIMANSAAAAGSA-------HPNGM 481

  Fly   191 RF-----KHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNA 250
            ..     ...||||.:|:   .::||                   ||.||:.||.|||:||..|.
  Fly   482 GVGLGSGSGLSSCSLSSN---TNNSG-------------------RTNFTNKQLTELEKEFHFNR 524

  Fly   251 YLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSES--PTFNLSTNSNG------SPQASPV 307
            ||:|.|||||||.|:|:|.||||||||||:||||...|.  |...|:.:|..      ..|..|.
  Fly   525 YLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQ 589

  Fly   308 SPQVKV 313
            .|::::
  Fly   590 PPELQL 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 37/55 (67%)
labNP_476613.1 Homeodomain 505..558 CDD:459649 37/52 (71%)

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