DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and lab

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:391 Identity:109/391 - (27%)
Similarity:146/391 - (37%) Gaps:143/391 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AAVAAAAMLPSI------PMLP---------YPASYVGSY----LFSLGI--------------- 65
            |||..|:..|.:      ||:.         :.....|||    :.|||:               
  Fly   236 AAVLHASYAPGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGN 300

  Fly    66 -------QQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSP---------GSLYHPYAQLFA 114
                   ||.|.||||||.|.........:.||.|||...|.||         |.:..|      
  Fly   301 LANNPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISP------ 359

  Fly   115 SKRKSSGFSNYEGCYPSPPLSANPN-SQQLP-------------------------PIHNLY--- 150
            ....||..|...|.:|:...|.:|| |..:|                         .:|:..   
  Fly   360 GSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNG 424

  Fly   151 -------------------------GSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK 190
                                     |||.:||: |....|...:.||:::.|. :.|......|.
  Fly   425 QLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGV-LSVQNSLIMANSAAAAGSA-HPNGMGVGLGS 487

  Fly   191 RFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRL 255
            . ...||||.:|:   .::||                   ||.||:.||.|||:||..|.||:|.
  Fly   488 G-SGLSSCSLSSN---TNNSG-------------------RTNFTNKQLTELEKEFHFNRYLTRA 529

  Fly   256 RRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSES--PTFNLSTNSNG------SPQASPVSPQVK 312
            |||||||.|:|:|.||||||||||:||||...|.  |...|:.:|..      ..|..|..|:::
  Fly   530 RRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQ 594

  Fly   313 V 313
            :
  Fly   595 L 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 36/51 (71%)
labNP_476613.1 Homeobox 505..557 CDD:278475 36/51 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439791
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.740

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