DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and ventx1.2

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_988861.1 Gene:ventx1.2 / 394455 XenbaseID:XB-GENE-920868 Length:262 Species:Xenopus tropicalis


Alignment Length:268 Identity:66/268 - (24%)
Similarity:97/268 - (36%) Gaps:82/268 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ALQQHPHVSSSPGSLYHPYAQLFASK---RKSSGFSNYE----GCYPSPPLSANPNSQQLPPIHN 148
            ::...||:..:|    .|.|....:|   |:..|....|    .|......:...::..||.:|.
 Frog    25 SVSSRPHIPCAP----QPLAPTKYAKEIPRRKDGQEQGEITSFQCSSEEARNRQFSNPSLPALHR 85

  Fly   149 LYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGP 213
                                    ||.:|.:::....|..|.    |||...:......|.|..|
 Frog    86 ------------------------SSGSSDEFSPAGSEDDGT----ESSGRNSQENDTEHRSKSP 122

  Fly   214 VEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNR 278
                     .:|..:|:|||||..|:..||:.|:...||....|.::|..|:|||.|||.|||||
 Frog   123 ---------KSDLQRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTWFQNR 178

  Fly   279 RVKQKK------------------------GGSESPTFNLSTNSNGSPQASPVS-------PQVK 312
            |:|.|:                        ||...|   |::.|...|.|.|..       ||..
 Frog   179 RMKLKRQIQDQQPSMVPPPVCYPQTFSYYPGGLPVP---LNSGSFYQPPAHPFQAPQHSFIPQPL 240

  Fly   313 VHELKVEA 320
            .|.:::.|
 Frog   241 HHHMRMSA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 28/55 (51%)
ventx1.2NP_988861.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..129 25/144 (17%)
Homeodomain 128..184 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.