DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and emx1

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_937787.1 Gene:emx1 / 378964 ZFINID:ZDB-GENE-031007-7 Length:231 Species:Danio rerio


Alignment Length:238 Identity:70/238 - (29%)
Similarity:94/238 - (39%) Gaps:75/238 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PYAQLFASKRKS--SGFSNYEG--CYPSP-----------PLSANPNSQQLPPIHNLYGSPVVGG 157
            |.|..:::...|  :|:.:..|  .||:|           |||.:|        |.|      |.
Zfish    30 PTALSYSAPADSFLNGYQSPAGRALYPNPELVFSETVNHAPLSMHP--------HQL------GS 80

  Fly   158 LPLPEPGSFCTSPSASSSASLDY-----TNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEIT 217
            .||..|..|.|    .....|::     .|.|   .|.||:                 |..|...
Zfish    81 APLQHPHFFGT----QHREPLNFYPWVLRNRF---FGHRFQ-----------------GNDVSQD 121

  Fly   218 PLI--NDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRV 280
            .|:  ..:|...|||||||:.:|||.|||.|..|.|:....|.::||.|.|||.|||:||||||.
Zfish   122 TLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQVKVWFQNRRT 186

  Fly   281 K---------------QKKGGSESPTFNLSTNSNGSPQASPVS 308
            |               :|||......:.::|...||.....:|
Zfish   187 KYKRQKLEEEGPECTQKKKGNHHINRWRIATKQTGSEDIDVMS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 33/70 (47%)
emx1NP_937787.1 Homeodomain 134..190 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 7/37 (19%)

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