DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and vax2

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_919390.1 Gene:vax2 / 373869 ZFINID:ZDB-GENE-030904-8 Length:307 Species:Danio rerio


Alignment Length:136 Identity:48/136 - (35%)
Similarity:64/136 - (47%) Gaps:12/136 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSS 227
            ||:..::|::||....|.....|....:|.            |...:.|...||........|..
Zfish    51 PGTSASTPTSSSEDGHDKLLGVDPDYCRRI------------LVRDAKGTIREIVLPKGLDLDRP 103

  Fly   228 KRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTF 292
            ||.||:||:.||..||.||....|:....|.|:|.:|.|||.|||:||||||.||||..::....
Zfish   104 KRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQTKDTDK 168

  Fly   293 NLSTNS 298
            ..|:.|
Zfish   169 RSSSTS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 31/55 (56%)
vax2NP_919390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 6/18 (33%)
Homeodomain 104..160 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..175 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..254
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.