Protein Alignment ind and Meox1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_063125617.1
• Gene: Meox1 / 363684
• RGDID: 1308911
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 269
• Identity: 57/269 - (21%)
• Similarity: 77/269 - (28%)
• Gaps: 110/269 - (40%)

  Fly    44 PSIPMLP---YPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSL 105
            |:.|..|   :|.|..|..| :||               .|.:|....|.:    |.:....|.|
  Rat    84 PAFPQTPDWHFPISEAGQRL-NLG---------------PAGSAREMGAGS----PGLVDGTGGL 128

  Fly   106 -----------YHPYAQLFASKRKSSGFSNYEGCYPSP--------------PLSANP------- 138
                       :....:|...|::.||    :...|.|              |..|.|
  Rat   129 GEDCMVLGTIAHETEKKLSRRKKERSG----QSVVPEPENEVEACEGGSARVPTGAGPRGWRLCS 189

  Fly   139 ------------NSQQL--------PPIHNLYGS----------------PVVGGLPLPEPGSFC 167
                        |.::|        ||...|..|                |.||.|..|| |...
  Rat   190 FSEFRVRCSKDQNQERLNERPFQLPPPTPTLTSSGPTQAACAHSYVDVKLPSVGALNFPE-GLAQ 253

  Fly   168 TSPSASS---SASLDYT-NNFDEPQGKRFKHE---------SSCSPNSS-PLKNHSSGGPVEITP 218
            ..||.||   .||:.:| .|...|.|......         |...|..: ||.:..|.|...|.|
  Rat   254 HRPSLSSPFPRASIFHTLLNSTGPSGLGNSRNRTWDTLFWVSWLLPTPTIPLLHQVSSGSGPIWP 318

  Fly   219 LINDYADSS 227
            :.|.:..:|
  Rat   319 VQNPFLGTS 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	57/269 (21%)
Meox1	XP_063125617.1	None