DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and en

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:370 Identity:96/370 - (25%)
Similarity:144/370 - (38%) Gaps:104/370 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRSFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQ 66
            |.:|.:.::||||....||      ||.|....|::          ..|:.||...:...|...:
  Fly   172 SLAFSISNILSDRFGDVQK------PGKSMENQASI----------FRPFEASRSQTATPSAFTR 220

  Fly    67 QQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSS-SPGSLYHPYAQLFASKRKSSGFSNYEGCYP 130
            ....:..:|||   ||||||.||..|::...::. :|.:....:.::..|:.:.|..:   ...|
  Fly   221 VDLLEFSRQQQ---AAAAAATAAMMLERANFLNCFNPAAYPRIHEEIVQSRLRRSAAN---AVIP 279

  Fly   131 SPPLS-----ANPNSQQL--------------------PPIHNLYGS-----PVVGGLPLPEPGS 165
             ||:|     |||....|                    ||:.:...|     |......:....|
  Fly   280 -PPMSSKMSDANPEKSALGSLCKAVSQIGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS 343

  Fly   166 FCTSPSASSSASLDYTNNFDEPQGKRFKHESS----CSPNSSPLKNHSS---------------- 210
            ..||.|:|||......::.:.....|.....|    .||...|:...|:                
  Fly   344 VATSSSSSSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSE 408

  Fly   211 -------GGPVEITPL----------------------INDYADSSKRIRTAFTSTQLLELEREF 246
                   ||..|:.|.                      ..|..:..||.||||:|.||..|:|||
  Fly   409 TGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREF 473

  Fly   247 SHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKG-GSESP 290
            :.|.||:..||.::::.|.|:|.|:||||||:|.|.||. ||::|
  Fly   474 NENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSKNP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 30/55 (55%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 30/55 (55%)
Engrail_1_C_sig 512..542 CDD:431338 3/7 (43%)

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