Protein Alignment ind and bsh

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 282
• Identity: 78/282 - (27%)
• Similarity: 111/282 - (39%)
• Gaps: 56/282 - (19%)

  Fly    70 QQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSS-----GFSNYEGCY 129
            |.....|.|..|:|:|:|.|.|...    .::.|.....|.:...|..:|:     |.|:|.|..
  Fly   104 QHSHPPQSHPPASASASATATARSN----QAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQ 164

  Fly   130 PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEP---GSFCTS----PSA--SSSASLDYTNNFD 185
            .|..|.:  .:.|.||:......|     |.|.|   ||..::    |:|  :....|..|..:.
  Fly   165 ISQQLGS--GAAQHPPVPTTQPQP-----PPPPPLNGGSGASNGVLYPNAPYTDHGFLQMTLGYL 222

  Fly   186 EPQGKRFKHESSCSPNSSPLKNHSSGGPVEITP------------LINDYADSSKR-IRTAFTST 237
            .|....:|   |..|......:...|.|....|            .:|......:| .||.|:..
  Fly   223 SPSSGTYK---SVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKARTVFSDP 284

  Fly   238 QLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK------GGSESPTFNLS- 295
            ||..||:.|....|||...|:|:|..|.|||.|||.||||||:|.||      ..:|...|:.|
  Fly   285 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSE 349

  Fly   296 --------TNSNGSPQASPVSP 309
                    |:|:|..:...::|
  Fly   350 PGKQPGEATSSSGDSKHGKLNP 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	29/56 (52%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	29/55 (53%)