Protein Alignment ind and prd

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 56/224 - (25%)
• Similarity: 91/224 - (40%)
• Gaps: 75/224 - (33%)

  Fly   154 VVGG----LPLPE------------PGSF-------------C---TSPSASSSASL-------- 178
            |:||    :..||            ||.|             |   |:||.|:.:.|
  Fly    93 VIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRDAPL 157

  Fly   179 --DYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYAD-----------SSKRI 230
              |.::....|.|...|..|||..:.|. .:|::|.|.:     .|.:|           ..:|.
  Fly   158 DNDMSSASGSPAGDGTKASSSCGSDVSG-GHHNNGKPSD-----EDISDCESEPGIALKRKQRRC 216

  Fly   231 RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK----------G 285
            ||.|:::||.||||.|....|.....|.|:|.|..|:|.::::||.|||.:.:|          |
  Fly   217 RTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPG 281

  Fly   286 GSESPTFNLSTNS------NGSPQASPVS 308
            |:.:...:::.:|      :..|..:|::
  Fly   282 GAAASVSHVAASSSLPSVVSSVPSMAPLA 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	23/55 (42%)
prd	NP_723721.1	PAX	27..154	CDD:238076	14/60 (23%)
		Homeodomain	214..270	CDD:459649	23/55 (42%)