DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and LOC3291475

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_061515274.1 Gene:LOC3291475 / 3291475 VectorBaseID:AGAMI1_000574 Length:555 Species:Anopheles gambiae


Alignment Length:385 Identity:87/385 - (22%)
Similarity:124/385 - (32%) Gaps:117/385 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PNLSQKKEKLGSPGG-----SPTAAAA----------VAAAAMLPSI-PMLPYPASYVGSYLFSL 63
            |...:.:..:|..||     ||:||:.          .|..::...: ....|||.:.|::|..|
Mosquito   160 PGRPEGRRTIGVGGGGTDRTSPSAASGDEGKPPTFGLRATQSLAEDLHARFGYPALHPGAHLSHL 224

  Fly    64 GIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKR-KSSGFSNYEG 127
            ..............|.....          .|.|.:..|.|  |   .||..:. .....:....
Mosquito   225 PAHHPAHHHAHHLHHHGTHL----------HHAHHTPPPAS--H---ALFGGRSWPYESCNTLNA 274

  Fly   128 CYPSPPLSANPN--SQQL------PPIH---NLYGSPVVGGL-PLPEP-----------GSFCTS 169
            |:......|:..  :||:      .|:|   :..||...||| .|..|           ||...:
Mosquito   275 CHQQAAQQAHQRLFAQQVSPADSTSPVHSERSYLGSAGGGGLATLAGPAGDHQLGGGRIGSSMRT 339

  Fly   170 PSASSSASLD-----------------YTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEIT 217
            ||.|.|...|                 :|.|.|:     ...|..|..              || 
Mosquito   340 PSPSDSERGDSHHHHLLHGGGGGGGDTHTENSDD-----VDIEEGCDD--------------EI- 384

  Fly   218 PLINDYADSS------------------KRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRL 264
            .:|:|..|.|                  ::.|..|:..|..||||.|....|||...|..:|:.:
Mosquito   385 DMIDDTDDGSLPTTERGGHPNGLGGHKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLI 449

  Fly   265 RLSEKQVKIWFQNRRVKQKKGGSESPTFNL-------STNSNGSPQASPVSPQVKVHELK 317
            ||:..||||||||.|.|.|:...|....:.       ...:.|.|....|:..|.|.:.|
Mosquito   450 RLTPTQVKIWFQNHRYKTKRAAHEKGALDHHHGGHGGGNGTGGLPSPRRVAVPVLVRDGK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 25/55 (45%)
LOC3291475XP_061515274.1 None

Return to query results.
Submit another query.