Protein Alignment ind and B-H1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 308
• Identity: 81/308 - (26%)
• Similarity: 121/308 - (39%)
• Gaps: 110/308 - (35%)

  Fly    25 GSPGGSPTA--------------AAAVAAAAMLPSI---PMLPYPASYVGSYLFSL--------- 63
            ||.|||..|              |:.||...:|||.   |. |:|.::..::..:|
  Fly   111 GSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQ-PHPPTHPHTHPHALMHPHGKLGH 174

  Fly    64 --------GIQQQQQQQQQQQQHAAAAAAAAA---AAAALQQHPHVSSSPGSLYHPYAQLFASKR 117
                    |:...|.....||.:|||||||||   ||||...                   |:..
  Fly   175 FPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAA-------------------AAAA 220

  Fly   118 KSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTN 182
            .::|.:       :||:...                |.||:.|..|          :...||.::
  Fly   221 AAAGVA-------APPVDGG----------------VDGGVGLAPP----------AGGDLDDSS 252

  Fly   183 NFDEPQGKRFKHESSCSPNSSPLKNH---SSGGPVE--------ITPLINDYADSSKRIRTAFTS 236
            ::         ||.:...:|..:.:|   |:||..:        .|..::..:...::.|||||.
  Fly   253 DY---------HEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTD 308

  Fly   237 TQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            .||..||:.|....|||...|.|:|::|.||:.|||.|:||||.|.|:
  Fly   309 HQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	28/55 (51%)
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	28/55 (51%)