DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HOXD11

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_067015.2 Gene:HOXD11 / 3237 HGNCID:5134 Length:338 Species:Homo sapiens


Alignment Length:306 Identity:85/306 - (27%)
Similarity:117/306 - (38%) Gaps:119/306 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAA 89
            |.|||....|...|           ||.|:                        |||||||||||
Human    91 GGPGGGGGGAGGYA-----------PYYAA------------------------AAAAAAAAAAA 120

  Fly    90 --AALQQH---------------PH-VSSSPGSLYHP-------YAQLFASKRKSSGFSNYEGCY 129
              ||:|:.               |. |.::||..:.|       |:.:..:.....||..:....
Human   121 EEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQGFDQFYEAA 185

  Fly   130 PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPE---------------PGSFCTSPSASSSASLD 179
            |.||. |.|  |..||     .:|     |.||               .||.||..:..|     
Human   186 PGPPF-AGP--QPPPP-----PAP-----PQPEGAADKGDPRTGAGGGGGSPCTKATPGS----- 232

  Fly   180 YTNNFDEPQGKRFKHESSCSPNSSP------LKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQ 238
                  ||:|..   |.|......|      .|:.|:..|           ..|::.|..:|..|
Human   233 ------EPKGAA---EGSGGDGEGPPGEAGAEKSSSAVAP-----------QRSRKKRCPYTKYQ 277

  Fly   239 LLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            :.||||||..|.|:::.:|::::..|.|:::||||||||||:|:||
Human   278 IRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 25/55 (45%)
HOXD11NP_067015.2 DUF3528 26..185 CDD:432284 31/128 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..270 27/128 (21%)
Homeodomain 267..323 CDD:459649 25/55 (45%)

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