DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HOXB3

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:349 Identity:96/349 - (27%)
Similarity:132/349 - (37%) Gaps:123/349 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDRPNLSQKKEKLGSP---GGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQ 73
            :.||...:.....|.|   |....||.:.|....:..:|:||...:...::|            :
Human   139 TQRPAARRCPRPSGRPHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATHL------------E 191

  Fly    74 QQQQHAAAAAAAAAAAAALQQHPHVSSSP--GSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSA 136
            ...|.:|.:..:...||     ||..|..  ||...|                  |..|. ||||
Human   192 GDYQRSACSLQSLGNAA-----PHAKSKELNGSCMRP------------------GLAPE-PLSA 232

  Fly   137 NPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSP- 200
            .|.|   ||                        |||:.:::   |:|.....|........|.| 
Human   233 PPGS---PP------------------------PSAAPTSA---TSNSSNGGGPSKSGPPKCGPG 267

  Fly   201 -----------------NSSPLKNHS---------------------------SGGPVEITPLIN 221
                             .:|.|||:|                           .||..:.:|   
Human   268 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSP--- 329

  Fly   222 DYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGG 286
            ..:.:|||.|||:||.||:|||:||..|.||.|.||:|:||.|.|||:|:||||||||:|.||  
Human   330 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK-- 392

  Fly   287 SESPTFNLSTNSNG-SPQASPVSP 309
             :.....|:::|.| ||..||..|
Human   393 -DQKAKGLASSSGGPSPAGSPPQP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 37/55 (67%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 37/55 (67%)
DUF4074 513..576 CDD:463833
Blue background indicates that the domain is not in the aligned region.

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