DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HOXA9

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_689952.1 Gene:HOXA9 / 3205 HGNCID:5109 Length:272 Species:Homo sapiens


Alignment Length:300 Identity:87/300 - (28%)
Similarity:125/300 - (41%) Gaps:69/300 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQ 68
            |||:.:..:|  .||..:...|:.|..|..||.:|..   |...    |.|:           |.
Human    14 SFLLGADAAD--ELSVGRYAPGTLGQPPRQAATLAEH---PDFS----PCSF-----------QS 58

  Fly    69 QQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPP 133
            :........:...||.|.|..||:..|.|        :|||.                  :|..|
Human    59 KATVFGASWNPVHAAGANAVPAAVYHHHH--------HHPYV------------------HPQAP 97

  Fly   134 L-SANPNSQQLPP-IHNLYGSPVVGGLP-------LPEPGSF----CTSPSASSSASLDYTNNFD 185
            : :|.|:.:.:.. :....|:....|||       .|||.|.    |.:....:.:..||.  ..
Human    98 VAAAAPDGRYMRSWLEPTPGALSFAGLPSSRPYGIKPEPLSARRGDCPTLDTHTLSLTDYA--CG 160

  Fly   186 EPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLIND------YADSSKRIRTAFTSTQLLELER 244
            .|...|.|..|..:.:.:..:|.|.|....|.|  |:      :|.|:::.|..:|..|.||||:
Human   161 SPPVDREKQPSEGAFSENNAENESGGDKPPIDP--NNPAANWLHARSTRKKRCPYTKHQTLELEK 223

  Fly   245 EFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            ||..|.||:|.||.|:|..|.|:|:||||||||||:|.||
Human   224 EFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 31/55 (56%)
HOXA9NP_689952.1 Hox9_act 1..193 CDD:461369 50/226 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..198 12/46 (26%)
Homeodomain 207..263 CDD:459649 31/55 (56%)

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