DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HOXA6

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:287 Identity:83/287 - (28%)
Similarity:112/287 - (39%) Gaps:86/287 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PGGSPTAAAAVAAAAMLPSIPML--------PYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAA 83
            ||..|:     ...:.|..:|:.        |:||||..|   ||..:........||.::..|.
Human    11 PGSLPS-----GQDSFLGQLPLYQAGYDALRPFPASYGAS---SLPDKTYTSPCFYQQSNSVLAC 67

  Fly    84 AAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHN 148
            ..|:                  |...|..|.|.:..||.|      ||      .:.:|..|...
Human    68 NRAS------------------YEYGASCFYSDKDLSGAS------PS------GSGKQRGPGDY 102

  Fly   149 LYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPL-----KNH 208
            |:.||                       ...|..:....|||....|.:....:||:     :.:
Human   103 LHFSP-----------------------EQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMN 144

  Fly   209 SSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKI 273
            |..|.|        |....:|.|..:|..|.||||:||..|.||:|.|||||||.|.|:|:|:||
Human   145 SCAGAV--------YGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKI 201

  Fly   274 WFQNRRVKQKKGGSESPTFNLSTNSNG 300
            ||||||:|.||   |:...| ||..:|
Human   202 WFQNRRMKWKK---ENKLIN-STQPSG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 33/51 (65%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 12/72 (17%)
Antp-type hexapeptide 136..141 0/4 (0%)
Homeobox 159..212 CDD:365835 33/52 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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