DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and HMX1

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_061815.2 Gene:HMX1 / 3166 HGNCID:5017 Length:348 Species:Homo sapiens


Alignment Length:245 Identity:61/245 - (24%)
Similarity:90/245 - (36%) Gaps:72/245 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPS 131
            ::::.|:::|..|.......|.|.||       ..||:|                     |..|.
Human    61 RRRRLQRRRQLLAGTGPGGEARARAL-------LGPGAL---------------------GLGPR 97

  Fly   132 PPLSANP--------NSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQ 188
            ||....|        .::..|..|..||    |||          ||..|...|.:........:
Human    98 PPPGPGPPFALGCGGAARWYPRAHGGYG----GGL----------SPDTSDRDSPETGEEMGRAE 148

  Fly   189 G--KRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYAD-----------------SSKRIRTAF 234
            |  .|.....:....::.|   ::.||...|...::.|:                 ..|:.||.|
Human   149 GAWPRGPGPGAVQREAAEL---AARGPAAGTEEASELAEVPAAAGETRGGVGVGGGRKKKTRTVF 210

  Fly   235 TSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            :.:|:.:||..|....|||...|..:|..|:|:|.||||||||||.|.|:
Human   211 SRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 27/55 (49%)
HMX1NP_061815.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..203 33/186 (18%)
Homeodomain 206..260 CDD:459649 26/53 (49%)
HMX family specific domain 1 263..273
HMX family specific domain 2 276..289
Blue background indicates that the domain is not in the aligned region.

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