Protein Alignment ind and msx2b

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571351.3
• Gene: msx2b / 30531
• ZFINID: ZDB-GENE-980526-492
• Length: 241
• Species: Danio rerio
• Alignment Length: 215
• Identity: 66/215 - (30%)
• Similarity: 94/215 - (43%)
• Gaps: 61/215 - (28%)

  Fly    87 AAAAAL----------QQHPHVSSSPGSL-----YHPYAQLFASKRK--SSGFSNYEGCYPSPPL 134
            :|:|:|          |:...|||.|.|:     .|...:.|..:|:  ||.|:..|       :
Zfish     2 SASASLKESDGDRDMEQRKTQVSSHPFSVESLISSHKTNKDFERRREDVSSQFAQTE-------I 59

  Fly   135 SANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCS 199
            ..:..|..:|....|..|||....|.|:.   |||...:|..|             :.:.||.|
Zfish    60 RDSCGSAGIPKHFMLQTSPVKSESPEPDD---CTSWVMNSRYS-------------QTRQESPC- 107

  Fly   200 PNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRL 264
                ||:.|.                ::::.||.||::|||.|||:|....|||...|.|.::.|
Zfish   108 ----PLRKHK----------------TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSL 152

  Fly   265 RLSEKQVKIWFQNRRVKQKK 284
            .|:|.||||||||||.|.|:
Zfish   153 TLTETQVKIWFQNRRAKAKR 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	30/55 (55%)
msx2b	NP_571351.3	Homeodomain	116..172	CDD:459649	30/55 (55%)