DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and hoxb8b

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:192 Identity:61/192 - (31%)
Similarity:86/192 - (44%) Gaps:40/192 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SNYEGCYPS--PPLSANP-------------NSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSA 172
            |||..| ||  |.|...|             ::.|.|..::      .|....|. .|:..:|.|
Zfish    21 SNYYDC-PSYTPDLGGRPSVLYGHNTGSAFQHAAQFPDFYH------HGTSSFPH-ASYQQTPCA 77

  Fly   173 SSSASLDYTNN------------FDEPQGKRFKHESSCSPNSSPLKNH-SSGGP--VEITPLIND 222
            .:... |.|.|            |..|... |.....|:...|.:::. .|..|  .::.|.:..
Zfish    78 VAYPG-DATGNILGQDGLQKQSFFGAPDSD-FTQFGDCNLKVSGIRDDLESAEPCTAQLFPWMRP 140

  Fly   223 YADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            .|...:|.|..::..|.||||:||..|.||:|.||||:::.|.|:|:||||||||||:|.||
Zfish   141 QATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 30/51 (59%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 1/4 (25%)
Homeobox 149..201 CDD:278475 30/51 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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