Protein Alignment ind and hoxd9a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571201.3
• Gene: hoxd9a / 30350
• ZFINID: ZDB-GENE-990415-121
• Length: 262
• Species: Danio rerio
• Alignment Length: 218
• Identity: 64/218 - (29%)
• Similarity: 97/218 - (44%)
• Gaps: 25/218 - (11%)

  Fly    81 AAAAAAAAAAALQQHPHVSSSPGSLYHPYA-QLFASKRK--------SSGFSNYEGCYPSPPLSA 136
            |..:|...|:....|...:::...:||||. |...|..:        .:...:..|.:|:...|.
Zfish    54 APKSAVFPASWSSVHQPSTAAVSGIYHPYVHQTHLSDNRYVRSWIEPVANHISLTGFHPNSRHSG 118

  Fly   137 NPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDY-TNNFDEPQGKRFKHESSCSP 200
            . .::.|||......:.......:||......|.||..:..... ::|....:.|..|.:....|
Zfish   119 T-KTESLPPKRTESAAFETETPSVPEFSLNAVSESADKATEERVGSDNSSHGEPKDEKQQQQLDP 182

  Fly   201 NSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLR 265
             |:|..|..             :|.|:::.|..:|..|.||||:||.:|.||:|.||.|:|..|.
Zfish   183 -SNPAANWI-------------HARSTRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILN 233

  Fly   266 LSEKQVKIWFQNRRVKQKKGGSE 288
            |:|:||||||||||:|.||...|
Zfish   234 LTERQVKIWFQNRRMKMKKMNRE 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	31/55 (56%)
hoxd9a	NP_571201.3	Hox9_act	1..182	CDD:461369	24/128 (19%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	107..187		17/81 (21%)
		Homeodomain	196..252	CDD:459649	31/55 (56%)