Protein Alignment ind and Hoxb1

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_220896.4
• Gene: Hoxb1 / 303491
• RGDID: 1310298
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 308
• Identity: 97/308 - (31%)
• Similarity: 130/308 - (42%)
• Gaps: 62/308 - (20%)

  Fly    31 PTAAAAVAAAAMLPSIPMLPYPA--SYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQ 93
            |:|.:|..      |.|....||  ||.|...:..|:.....||.              :...:|
  Rat    19 PSAYSAPT------SFPPSSAPAVDSYAGESRYGGGLPSSALQQN--------------SGYPVQ 63

  Fly    94 QHPH---VS--SSPGSLYHPYA---QLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLY 150
            |.|.   ||  ||..|.|.|.|   ....|:..|.|.|..:|.|..|    :....||..:.:.|
  Rat    64 QPPSSLGVSFPSSAPSGYAPAACNPSYGPSQYYSMGQSEGDGGYFHP----SSYGAQLGGLPDSY 124

  Fly   151 GSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHS------ 209
            |:..||..|.|.|     .|...:..:.::.:.:|.....:   |||||...|.|...:
  Rat   125 GAGGVGSGPYPPP-----QPPYGTEQTSNFASAYDLLSEDK---ESSCSSEPSSLTARTFDWMKV 181

  Fly   210 SGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIW 274
            ...|.:...:......:...:||.||:.||.|||:||..|.||||.||:|||..|.|:|.|||||
  Rat   182 KRNPPKTAKVSELGLGTPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIW 246

  Fly   275 FQNRRVKQKK----GG----------SESPTFNLSTNSNGSPQASPVS 308
            |||||:||||    ||          .|:.......::..||:|||.|
  Rat   247 FQNRRMKQKKREREGGRVPAGPPGCPKEAAGEASDQSACTSPEASPSS 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	35/51 (69%)
Hoxb1	XP_220896.4	Homeobox	203..255	CDD:278475	35/51 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810