DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Dlx4

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:240 Identity:59/240 - (24%)
Similarity:89/240 - (37%) Gaps:68/240 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AAAAAAAAAAALQQHPHVSSSPG-SLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLP 144
            |.|::..||..|...|..::||. |....|..|.:..            ||.|   |.|..    
  Rat    22 APASSVVAAYQLGLSPGTAASPDLSFSQTYGHLLSYS------------YPGP---ATPGD---- 67

  Fly   145 PIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHES---SCSPNSSPLK 206
                                |:.:|...|::.|..:....:.||....:.|.   |..|:...|.
  Rat    68 --------------------SYLSSQQQSAAPSRPFHQPTEHPQELEAESEKLALSLEPSQPSLT 112

  Fly   207 NHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQV 271
            .                  ..::.||.::|.||..|.:.|.|..||:...|.::|.:|.|::.||
  Rat   113 R------------------KLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQV 159

  Fly   272 KIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQASPVSPQVKVHEL 316
            ||||||:|.|.||...:| :..|..:.:|.|      |.:..|.|
  Rat   160 KIWFQNKRSKYKKLLKQS-SGELEEDFSGRP------PSLSPHSL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 24/55 (44%)
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 24/55 (44%)

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