Protein Alignment ind and hoxc6a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571198.1
• Gene: hoxc6a / 30346
• ZFINID: ZDB-GENE-990415-113
• Length: 231
• Species: Danio rerio
• Alignment Length: 228
• Identity: 68/228 - (29%)
• Similarity: 94/228 - (41%)
• Gaps: 52/228 - (22%)

  Fly   113 FASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPI------------HNLYGSP--------VVGG 157
            ||:...|...|..:...|:.||    ||.....:            :.:|.||        |.|.
Zfish     5 FANPSLSCHLSGGQEVLPNMPL----NSTTYDSVRHFSSYGTTVTQNRIYASPFYSPQDNVVFGS 65

  Fly   158 LPLP-EPGS-----------FCTSPSASSSASLDYTNNFDEPQGKRFKHESSCS-----PNSSPL 205
            ...| |.||           .|...|...:|.......::..|.:....:...:     |....:
Zfish    66 SRGPYEYGSNVFLQDKDVLPSCRQTSMGLNAQSHVAQEYNLEQARAGTQDQKANNIQIYPWMQRM 130

  Fly   206 KNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQ 270
            .:||..|          |....:|.|..::..|.||||:||..|.||:|.|||||||.|.|:|:|
Zfish   131 NSHSGVG----------YGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 185

  Fly   271 VKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQ 303
            :||||||||:|.||..:.:.|.. .|.|.|:||
Zfish   186 IKIWFQNRRMKWKKETNLTSTVP-GTESAGTPQ 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	33/55 (60%)
hoxc6a	NP_571198.1	Antp-type hexapeptide	123..128		1/4 (25%)
		Homeodomain	143..199	CDD:459649	33/55 (60%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	200..231		6/19 (32%)