Protein Alignment ind and hoxc4a

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 241
• Identity: 85/241 - (35%)
• Similarity: 115/241 - (47%)
• Gaps: 55/241 - (22%)

  Fly   101 SPGSLYHPYAQLFASKRKSSGFS-NYEGCYPSPPLS-----ANPNSQQLPPIHNLYGSPVVGGL- 158
            |..|....::..:.|:.:.||:. :::..|| |..|     .|..|...|.....:|.|..|.|
Zfish    24 SQNSYIPEHSPEYYSRARDSGYQHHHQELYP-PRASYQERQYNCASIPEPDTQRGHGLPHAGHLL 87

  Fly   159 ---------PLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPV 214
                     |.|.|.|..| |||:|||.     |...|:          .||||.    |:..||
Zfish    88 GKGQSASCEPPPLPLSPAT-PSAASSAC-----NQATPE----------HPNSSA----SAKQPV 132

  Fly   215 --------EITPLINDYADSS-KRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQ 270
                    .::.:.:.|..:. ||.|||:|..|:||||:||.:|.||:|.||||||:.|.|||:|
Zfish   133 VYPWMKKIHVSTVNSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQ 197

  Fly   271 VKIWFQNRRVKQKKG--------GSESPTFNLSTNSNGSPQASPVS 308
            :||||||||:|.||.        .|.|.| .:|:.||.|..|..|:
Zfish   198 IKIWFQNRRMKWKKDHRLPNTKVRSSSST-GISSGSNTSSAAGVVA 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	35/51 (69%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		23/78 (29%)
		Antp-type hexapeptide	133..138		0/4 (0%)
		Homeobox	157..210	CDD:278475	35/52 (67%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		9/32 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810