Protein Alignment ind and hoxb9a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571196.2
• Gene: hoxb9a / 30344
• ZFINID: ZDB-GENE-990415-109
• Length: 249
• Species: Danio rerio
• Alignment Length: 320
• Identity: 81/320 - (25%)
• Similarity: 117/320 - (36%)
• Gaps: 114/320 - (35%)

  Fly     4 SFLMDSLLS---DRPNLSQ------KKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSY 59
            ::.:||::|   :.||.|:      ...:...||..|.          .||....|.|..:..|:
Zfish     9 NYYVDSIISHEGEDPNASRFSNVQYSSARQPGPGEHPE----------FPSCSFQPKPPVFSSSW 63

  Fly    60 L-FSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFS 123
            . ||                                 .|.|:...::||||
Zfish    64 SPFS---------------------------------SHASNGLPAVYHPY-------------- 81

  Fly   124 NYEGCYPSPP------------LSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSF---------- 166
                 .|:.|            |...|.::.||....:...|::|  .|.||...
Zfish    82 -----IPTQPVPSTDTRYLRTWLDCAPRAEPLPGQGQVKMEPLLG--HLGEPPKLVGQHEYILES 139

  Fly   167 CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLIN-DYADSSKRI 230
            .|:...:|..|..:.:|.|..:|...|.                 ||.:..|..| .:|.||::.
Zfish   140 STAREINSGHSAGFEDNKDICEGSEDKE-----------------GPDQNDPSANWLHARSSRKK 187

  Fly   231 RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESP 290
            |..:|..|.||||:||..|.||:|.||.|:|..|.|:|:||||||||||:|.||...:.|
Zfish   188 RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKDQP 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	31/55 (56%)
hoxb9a	NP_571196.2	Hox9_act	1..171	CDD:461369	42/242 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	146..182		10/52 (19%)
		Homeodomain	185..241	CDD:459649	31/55 (56%)