Protein Alignment ind and hoxb6a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571194.1
• Gene: hoxb6a / 30341
• ZFINID: ZDB-GENE-990415-106
• Length: 228
• Species: Danio rerio
• Alignment Length: 292
• Identity: 73/292 - (25%)
• Similarity: 108/292 - (36%)
• Gaps: 108/292 - (36%)

  Fly    27 PGGSPTAAAAVAAAAMLPSIPMLPYP-ASYVGSYLFSLGIQQQQQ----QQQQQQQHAAAAAAA- 85
            |||..:....:...:...:.|:..|| |:|.||     .:|::..    .||....::.|.||.
Zfish    15 PGGQESFLGQIPLYSSGYTDPLRHYPGAAYGGS-----SVQEKAYPSSFYQQANGAYSRATAAGP 74

  Fly    86 --------------AAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSA 136
                          |.|.|::::|..|.|.             ..||:.       |..|...|.
Zfish    75 CDYATASFYREKDPACALASIEEHSFVLSQ-------------DHRKTD-------CTGSTGKSI 119

  Fly   137 NPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPN 201
            .|.:.:..|...:|                                    |..:|.   :||:
Zfish   120 YPEADEQKPSAPVY------------------------------------PWMQRM---NSCN-- 143

  Fly   202 SSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRL 266
                               ..:.::.:|.|..:|..|.||||:||..|.||:|.||||||:.|.|
Zfish   144 -------------------GTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 189

  Fly   267 SEKQVKIWFQNRRVKQKKGGSESPTFNLSTNS 298
            :|:|:||||||||:|.||   |:...|.|..|
Zfish   190 TERQIKIWFQNRRMKWKK---ENKLINCSQTS 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	33/55 (60%)
hoxb6a	NP_571194.1	Antp-type hexapeptide	132..137		2/40 (5%)
		Homeodomain	151..207	CDD:459649	33/55 (60%)