Protein Alignment ind and hoxb1a

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_571190.2
• Gene: hoxb1a / 30337
• ZFINID: ZDB-GENE-990415-101
• Length: 316
• Species: Danio rerio
• Alignment Length: 297
• Identity: 89/297 - (29%)
• Similarity: 119/297 - (40%)
• Gaps: 93/297 - (31%)

  Fly   101 SPGSLYHPYAQLF--------ASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYG---SPV 154
            ||.:.||...|.|        ||...::....|.|....||.:|..:..|    :.:|.   ...
Zfish    23 SPKAGYHHLDQAFPGPFHTGHASDSYNADGRLYVGGSNQPPTAAAQHQHQ----NGIYAHHQHQN 83

  Fly   155 VGGLPLPEPGSFCTSPSASSSASLDYTNN--FDEP-QGKRFKHESSCS-PNSSPLKNHSSG---- 211
            ..|:.|...|:..||....:.|:.||..:  |..| |...:.|.|..| .|:||.....:|
Zfish    84 QTGMGLTYGGTGTTSYGTQACANSDYAQHQYFINPEQDGMYYHSSGFSTSNASPHYGSMAGAYCG 148

  Fly   212 --GPVEITPLIN---------------DYADSS-----------------------KR------- 229
              |.|...|..:               .|||.|                       ||
Zfish   149 AQGAVPAAPYQHHGCEGQDHQRAYSQGTYADLSASQGTEKDTDQPPPGKTFDWMKVKRNPPKTGK 213

  Fly   230 -----------IRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK 283
                       |||.||:.||.|||:||..:.||:|.||:|||..|.|:|.||||||||||:|||
Zfish   214 VAEYGLGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQK 278

  Fly   284 KGGSE--SPTFNLST---------NSNGSPQASPVSP 309
            |...|  :|..:.|:         :::.||:||| ||
Zfish   279 KREKEGLAPASSTSSKDLEDQSDHSTSTSPEASP-SP 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	37/73 (51%)
hoxb1a	NP_571190.2	Homeodomain	226..279	CDD:459649	34/52 (65%)