Protein Alignment ind and Dbx1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001009644.1
• Gene: Dbx1 / 292934
• RGDID: 1308896
• Length: 335
• Species: Rattus norvegicus
• Alignment Length: 319
• Identity: 78/319 - (24%)
• Similarity: 110/319 - (34%)
• Gaps: 103/319 - (32%)

  Fly     4 SFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQ 68
            |||::.|:    .:|:....|  |...|||:.         |.|....|.:...|....||....
  Rat    38 SFLVEDLI----RISRPPTYL--PRSIPTASL---------SPPRQEAPTALADSGTSDLGSPGS 87

  Fly    69 QQQQQQQQQHAAAAAAAA-----AAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGC 128
            ..::....|.|.:.|:..     ...|.|...|...:||..|..|..:.||       |..:||.
  Rat    88 GSRRGSSPQTALSPASEPTFLKFGVNAILSSAPRRETSPALLQSPPPKTFA-------FPYFEGS 145

  Fly   129 Y-PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRF 192
            : |....|..|.|..:.||                ||:| :.|.|:              :||
  Rat   146 FQPFIRSSYFPASSSVVPI----------------PGTF-SWPLAA--------------RGK-- 177

  Fly   193 KHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRR 257
                   |....|:                        |..|:..|...||:.|....|:|:..|
  Rat   178 -------PRRGMLR------------------------RAVFSDVQRKALEKTFQKQKYISKPDR 211

  Fly   258 IEIANRLRLSEKQVKIWFQNRRVKQK---------KGGSESPTFNLSTNSNGSPQASPV 307
            .::|::|.|.:.||||||||||:|.:         .||....|  |.|..|..|..|.|
  Rat   212 KKLASKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQT--LPTKLNPHPDLSDV 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	23/64 (36%)
Dbx1	NP_001009644.1	PRK12323	<49..182	CDD:481241	40/190 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	56..102		11/54 (20%)
		Homeodomain	184..238	CDD:459649	23/77 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	240..335		9/31 (29%)