Protein Alignment ind and Meox2

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_058845.2
• Gene: Meox2 / 29279
• RGDID: 3079
• Length: 303
• Species: Rattus norvegicus
• Alignment Length: 277
• Identity: 82/277 - (29%)
• Similarity: 111/277 - (40%)
• Gaps: 94/277 - (33%)

  Fly    77 QHAAAAAAAAAAAAALQQHPHVSSSPG----SLYHPYAQLFASKRKS--SGFSNYEGCYPS---- 131
            :|.......:..|.|...||...||..    |.:..|.:|..|....  :|:.|.||.:.|
  Rat     2 EHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQHHR 66

  Fly   132 ---------------------------PPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGS---- 165
                                       |.:|:.|::.:    |:|...|..|| | ||.||
  Rat    67 GHHHHHHHHHHHHQQQQHQALQSNWHLPQMSSPPSAAR----HSLCLQPDSGG-P-PELGSSPPV 125

  Fly   166 FC--------TSPSASSSASLDYTNNFDEP------QGKRFKHESSCSP--------NSSPLKNH 208
            .|        ::|:.::.|..||......|      .|.:.|.:||.|.        ||.|.|.
  Rat   126 LCSNSSSLGSSTPTGAACAPGDYGRQALSPAEVEKRSGSKRKSDSSDSQEGNYKSEVNSKPRKE- 189

  Fly   209 SSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKI 273
                                  |||||..|:.|||.||:|:.||:||||.|||..|.|:|:|||:
  Rat   190 ----------------------RTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKV 232

  Fly   274 WFQNRRVKQK--KGGSE 288
            ||||||:|.|  |||.:
  Rat   233 WFQNRRMKWKRVKGGQQ 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	35/57 (61%)
Meox2	NP_058845.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..191		28/156 (18%)
		Homeodomain	187..243	CDD:459649	35/78 (45%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	279..303