Protein Alignment ind and Gsx1

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001178592.1
• Gene: Gsx1 / 288457
• RGDID: 1310020
• Length: 261
• Species: Rattus norvegicus
• Alignment Length: 295
• Identity: 100/295 - (33%)
• Similarity: 127/295 - (43%)
• Gaps: 93/295 - (31%)

  Fly     1 MSRSFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPY--PASYVGSYLFSL 63
            |.||||:|||:     |.:..:| .:|.|||.              |:.||  |..:.
  Rat     1 MPRSFLVDSLV-----LREASDK-KAPEGSPP--------------PLFPYAVPPPHA------- 38

  Fly    64 GIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGC 128
                         .|..:..|..|..|.|.....:..:...|:.|
  Rat    39 -------------LHGLSPGACHARKAGLLCVCPLCVTASQLHGP-------------------- 70

  Fly   129 YPSPP----LSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQG 189
             |.||    |.|:     .||..:.|....:|......|| ...||:|:::|:..|..::..|..
  Rat    71 -PGPPALPLLKAS-----FPPFGSQYCHAPLGRQHSVSPG-VAHSPAAAAAAAALYQTSYPLPDP 128

  Fly   190 KRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSR 254
            ::| |..|...:|:.|                   .||||:||||||||||||||||:.|.||||
  Rat   129 RQF-HCISVDSSSNQL-------------------PSSKRMRTAFTSTQLLELEREFASNMYLSR 173

  Fly   255 LRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSES 289
            |||||||..|.||||||||||||||||.||.|..|
  Rat   174 LRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGS 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	45/51 (88%)
Gsx1	NP_001178592.1	Homeobox	150..202	CDD:278475	45/51 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	98	1.000	Domainoid score	I7019
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1341872at2759
OrthoFinder	1	1.000	-	-		FOG0005158
OrthoInspector	1	1.000	-	-		otm44565
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24339
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.010