Protein Alignment ind and Hoxb8

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001178578.1
• Gene: Hoxb8 / 24457
• RGDID: 1586211
• Length: 243
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 62/200 - (31%)
• Similarity: 84/200 - (42%)
• Gaps: 54/200 - (27%)

  Fly   100 SSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSP--VVGGLPLPE 162
            ||.||..||              |..:..|..|...:....||.|.....:|.|  ..|..||..
  Rat    43 SSGGSFQHP--------------SQIQEFYHGPSSLSTAPYQQNPCAVACHGDPGNFYGYDPLQR 93

  Fly   163 PGSF------------CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVE 215
            ...|            |...:||...        :|.:|      |..||:           |.:
  Rat    94 QSLFGAQDPDLVQYADCKLAAASGLG--------EEAEG------SEQSPS-----------PTQ 133

  Fly   216 ITPLINDYADSSKRI-RTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRR 279
            :.|.:...|.:.:|. |..::..|.||||:||..|.||:|.||||:::.|.|:|:||||||||||
  Rat   134 LFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR 198

  Fly   280 VKQKK 284
            :|.||
  Rat   199 MKWKK 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	31/56 (55%)
Hoxb8	NP_001178578.1	Homeodomain	147..203	CDD:459649	31/55 (56%)