DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Dbx2

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_997416.2 Gene:Dbx2 / 223843 MGIID:107445 Length:377 Species:Mus musculus


Alignment Length:286 Identity:69/286 - (24%)
Similarity:92/286 - (32%) Gaps:106/286 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRSFLMDSLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPML-PYPASYVGSYLFSLG 64
            :.:|||:::||              ..|..||.|......|..|..|.| |.|||.|...|    
Mouse    96 LGKSFLIENLL--------------RAGAGPTHAPPPPRPAPGPECPQLRPLPASPVPLKL---- 142

  Fly    65 IQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCY 129
                            ..|.......|.|..|  ..:||             .:.|.|.      
Mouse   143 ----------------CPAGPFGVRWAFQMPP--GRAPG-------------ERDSAFQ------ 170

  Fly   130 PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKH 194
            ||.|:.:.|.....||.:    |...||        .|..|:                       
Mouse   171 PSAPVPSKPFLLSAPPFY----SACCGG--------SCRRPA----------------------- 200

  Fly   195 ESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKR----IRTAFTSTQLLELEREFSHNAYLSRL 255
                ||.:...:.|.       .||:...::|..|    .|..|:..|...||:.|....|:|:.
Mouse   201 ----SPTAFSREEHG-------LPLLTQDSNSKARRGILRRAVFSEEQRKALEKMFQKQKYISKT 254

  Fly   256 RRIEIANRLRLSEKQVKIWFQNRRVK 281
            .|.::|..|.|.|.||||||||||:|
Mouse   255 DRRKLAVSLGLKESQVKIWFQNRRMK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 25/58 (43%)
Dbx2NP_997416.2 COG5576 <217..334 CDD:227863 26/64 (41%)
Homeodomain 229..283 CDD:459649 24/52 (46%)

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