DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and GSX1

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_663632.1 Gene:GSX1 / 219409 HGNCID:20374 Length:264 Species:Homo sapiens


Alignment Length:354 Identity:108/354 - (30%)
Similarity:127/354 - (35%) Gaps:171/354 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRSFLMDSLLSDRPNLSQKKEKLGSP---------------GGSPTAAAAVAAAAML------- 43
            |.||||:|||:  .....:||...|||               |.||.|..|..|..:.       
Human     1 MPRSFLVDSLV--LREAGEKKAPEGSPPPLFPYAVPPPHALHGLSPGACHARKAGLLCVCPLCVT 63

  Fly    44 ----------PSIPML-----PYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAA------AAAAA 87
                      |::|:|     |:.:.|..:   .||           :||:|.:      .||||
Human    64 ASQLHGPPGPPALPLLKASFPPFGSQYCHA---PLG-----------RQHSAVSPGVAHGPAAAA 114

  Fly    88 AAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGS 152
            |||||                                |:..|                       
Human   115 AAAAL--------------------------------YQTSY----------------------- 124

  Fly   153 PVVGGLPLPEPGSF-CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEI 216
                  |||:|..| |.|..:||                          |..|            
Human   125 ------PLPDPRQFHCISVDSSS--------------------------NQLP------------ 145

  Fly   217 TPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK 281
                     ||||:||||||||||||||||:.|.|||||||||||..|.||||||||||||||||
Human   146 ---------SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVK 201

  Fly   282 QKKGGSESPTFNLSTNSNGSPQASPVSPQ 310
            .||.|..|   |......|.......:||
Human   202 HKKEGKGS---NHRGGGGGGAGGGGSAPQ 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 47/55 (85%)
GSX1NP_663632.1 SNAG domain. /evidence=ECO:0000250 1..20 9/20 (45%)
Homeodomain 148..204 CDD:459649 47/55 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..264 9/30 (30%)

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