DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ind and EMX1

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_004088.2 Gene:EMX1 / 2016 HGNCID:3340 Length:290 Species:Homo sapiens


Alignment Length:316 Identity:86/316 - (27%)
Similarity:118/316 - (37%) Gaps:121/316 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSFLMDSLLSDRPNLSQKKEKLGSPG--------GSPTAAAAVAAAAMLPSIPMLPYP----ASY 55
            |.|.::||::          |.|..|        ||...|||.:...:.|:....|:|    |::
Human    41 RGFTIESLVA----------KDGGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAF 95

  Fly    56 VGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSS 120
            |..:                     .|||||.|..:|...|.: ..|.::.||...:        
Human    96 VSGF---------------------PAAAAAGAGRSLYGGPEL-VFPEAMNHPALTV-------- 130

  Fly   121 GFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDY----- 180
                    :|:..|.|:|    |.|.|:.:|                    |.....|.:     
Human   131 --------HPAHQLGASP----LQPPHSFFG--------------------AQHRDPLHFYPWVL 163

  Fly   181 TNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELERE 245
            .|.|   .|.||  ::|..|....|.:    ||         :|...|||||||:.:|||.|||.
Human   164 RNRF---FGHRF--QASDVPQDGLLLH----GP---------FARKPKRIRTAFSPSQLLRLERA 210

  Fly   246 FSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK--------------QKKGGS 287
            |..|.|:....|.::|..|.|||.|||:||||||.|              |||.||
Human   211 FEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 33/69 (48%)
EMX1NP_004088.2 Homeodomain 193..249 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..290 5/18 (28%)

Return to query results.
Submit another query.