Protein Alignment ind and ceh-62

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_496326.2
• Gene: ceh-62 / 187642
• WormBaseID: WBGene00011069
• Length: 278
• Species: Caenorhabditis elegans
• Alignment Length: 222
• Identity: 57/222 - (25%)
• Similarity: 88/222 - (39%)
• Gaps: 70/222 - (31%)

  Fly   102 PGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSF 166
            |.|.:|||.:                                 ||      |...|..||...|.
 Worm     4 PSSAFHPYTR---------------------------------PI------PTTSGHDLPVDDSL 29

  Fly   167 CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHS-------SGGPVEITPLINDYA 224
            ....||.:..:|           .:.:..|...|:..|:|:.|       :..|:..||.|.:..
 Worm    30 RLLLSAEALIAL-----------AQLQDASKILPSYEPVKDFSPQLLPAMTPTPIIATPSIPEQP 83

  Fly   225 ----------DSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRR 279
                      :.|:|.||.|:..|...||.|:..::|::|.:|..:|..|:|||.|||.||||||
 Worm    84 QPLQSPSAPNEKSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRR 148

  Fly   280 VKQKKGGSESPTFNLSTNSNGSPQASP 306
            .|.|:   :..:.|.|.:::.|.::||
 Worm   149 AKDKR---DRKSENASNHTSNSRRSSP 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	26/55 (47%)
ceh-62	NP_496326.2	Homeodomain	97..153	CDD:459649	26/55 (47%)