DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and ceh-62

DIOPT Version :9

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_496326.2 Gene:ceh-62 / 187642 WormBaseID:WBGene00011069 Length:278 Species:Caenorhabditis elegans


Alignment Length:222 Identity:57/222 - (25%)
Similarity:88/222 - (39%) Gaps:70/222 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSF 166
            |.|.:|||.:                                 ||      |...|..||...|.
 Worm     4 PSSAFHPYTR---------------------------------PI------PTTSGHDLPVDDSL 29

  Fly   167 CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHS-------SGGPVEITPLINDYA 224
            ....||.:..:|           .:.:..|...|:..|:|:.|       :..|:..||.|.:..
 Worm    30 RLLLSAEALIAL-----------AQLQDASKILPSYEPVKDFSPQLLPAMTPTPIIATPSIPEQP 83

  Fly   225 ----------DSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRR 279
                      :.|:|.||.|:..|...||.|:..::|::|.:|..:|..|:|||.|||.||||||
 Worm    84 QPLQSPSAPNEKSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRR 148

  Fly   280 VKQKKGGSESPTFNLSTNSNGSPQASP 306
            .|.|:   :..:.|.|.:::.|.::||
 Worm   149 AKDKR---DRKSENASNHTSNSRRSSP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeobox 231..283 CDD:278475 25/51 (49%)
ceh-62NP_496326.2 Homeobox 99..152 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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