Protein Alignment ind and ceh-27

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001256348.1
• Gene: ceh-27 / 185853
• WormBaseID: WBGene00000449
• Length: 263
• Species: Caenorhabditis elegans
• Alignment Length: 224
• Identity: 61/224 - (27%)
• Similarity: 88/224 - (39%)
• Gaps: 78/224 - (34%)

  Fly   119 SSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCT---SPSASSSASLDY 180
            |||.||..        ::.|||                  ..|...:|.|   |..|:::|.:.|
 Worm     2 SSGSSNSS--------TSAPNS------------------VTPTTDAFSTLSISAPATTAAQMSY 40

  Fly   181 TNNFDEPQGKRFKHESSCSPNSS--------PLKNH--------------SSGGPVEITPLINDY 223
               |..|  .::.|:.| |.|:|        |:..|              :.|...:...:|
 Worm    41 ---FAFP--NQYPHDFS-SYNTSAAYATAPYPMATHPQLANFNRFQTNQLNLGLTTQQNMMI--- 96

  Fly   224 ADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK---- 284
              |.::.|..|:..|:..|||:|..|.|||...|..:|..:.||..||||||||:|.|.|:
 Worm    97 --SRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEKE 159

  Fly   285 ----GG--------SESPTFNLSTNSNGS 301
                ||        ::|...|.|:.|.||
 Worm   160 KKMDGGCYRDSDRDTDSDRDNDSSGSLGS 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)
ceh-27	NP_001256348.1	Homeodomain	99..155	CDD:459649	25/55 (45%)