DRSC/TRiP Functional Genomics Resources

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Protein Alignment ind and Msx3

DIOPT Version :10

Sequence 1:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_034966.1 Gene:Msx3 / 17703 MGIID:106587 Length:204 Species:Mus musculus


Alignment Length:93 Identity:38/93 - (40%)
Similarity:50/93 - (53%) Gaps:21/93 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SCSPNS-SP----LKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLR 256
            ||.|.: ||    |:.|.                ::::.||.||:.|||.|||:|....|||...
Mouse    68 SCPPRAPSPPPCTLRKHK----------------TNRKPRTPFTTAQLLALERKFHQKQYLSIAE 116

  Fly   257 RIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            |.|.::.|.|:|.||||||||||.|.|:
Mouse   117 RAEFSSSLSLTETQVKIWFQNRRAKAKR 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
indNP_996087.2 Homeodomain 228..284 CDD:459649 30/55 (55%)
Msx3NP_034966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..89 7/36 (19%)
Homeodomain 88..144 CDD:459649 30/55 (55%)

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