Protein Alignment ind and Msx1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_034965.2
• Gene: Msx1 / 17701
• MGIID: 97168
• Length: 303
• Species: Mus musculus
• Alignment Length: 274
• Identity: 80/274 - (29%)
• Similarity: 108/274 - (39%)
• Gaps: 85/274 - (31%)

  Fly    25 GSPGGSPTAAAAVAAA------AMLPSIP--MLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAA 81
            |..|.:|.||||.|.|      ...|.:|  :||:...         .:....::...::....|
Mouse    27 GGVGQAPGAAAATATAMGTDEEGAKPKVPASLLPFSVE---------ALMADHRKPGAKESVLVA 82

  Fly    82 AAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPI 146
            :..|.||..::|   |:.:.||||..|.|                   ||.|          .|:
Mouse    83 SEGAQAAGGSVQ---HLGTRPGSLGAPDA-------------------PSSP----------RPL 115

  Fly   147 HNLYGSPVVGG-LPLPEPGSFCTSPSASSSASLDYT-----NNFDEPQGKRFKHESSCSPNSSPL 205
                |...||| |.|||....    .|.|...||.|     ..|..|..:|.      ||.:..|
Mouse   116 ----GHFSVGGLLKLPEDALV----KAESPEKLDRTPWMQSPRFSPPPARRL------SPPACTL 166

  Fly   206 KNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQ 270
            :.|.                ::::.||.||:.|||.|||:|....|||...|.|.::.|.|:|.|
Mouse   167 RKHK----------------TNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQ 215

  Fly   271 VKIWFQNRRVKQKK 284
            |||||||||.|.|:
Mouse   216 VKIWFQNRRAKAKR 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	30/55 (55%)
Msx1	NP_034965.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	22..53		9/25 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	90..112		10/43 (23%)
		PTZ00449	<99..>248	CDD:185628	61/190 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	135..163		9/33 (27%)
		Homeodomain	173..229	CDD:459649	30/55 (55%)