Protein Alignment ind and nob-1

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_001369824.1
• Gene: nob-1 / 176641
• WormBaseID: WBGene00003779
• Length: 243
• Species: Caenorhabditis elegans
• Alignment Length: 317
• Identity: 75/317 - (23%)
• Similarity: 121/317 - (38%)
• Gaps: 88/317 - (27%)

  Fly     4 SFLMDSLLSDRPNLSQKKEKLGS----PGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLG 64
            |.:...:.:|.|  ...||.:.|    |...|:||||:      |||
 Worm     3 SVMQQMINNDSP--EDSKESITSVQQTPFFWPSAAAAI------PSI------------------ 41

  Fly    65 IQQQQQQQQQQQQHAAAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCY 129
               |.:.:.:::....::             |.::.|...:..|            |.:...|..
 Worm    42 ---QGESRSERESETGSS-------------PQLAPSSTGMVMP------------GTAGMYGFG 78

  Fly   130 PSPPLSANPNSQQLPPIH-NLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFK 193
            ||...:||.....:.|:: :.|.:      ||...|.:      |......:|.|:..|     .
 Worm    79 PSRMPTANEFGMMMNPVYTDFYQN------PLASTGWY------SYGQPYQFTANYSIP-----S 126

  Fly   194 HESSCSPNSSPLKNHSSGGPVEITPLINDYADS--SKRIRTAFTSTQLLELEREFSHNAYLSRLR 256
            .:.:.|..:.|....||........:...:|.|  .|:.|..:...|:..||.|:|.|.||:..|
 Worm   127 LDGNLSDITIPTTAGSSAATTPNAAMHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKR 191

  Fly   257 RIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGS-PQASPVSPQVK 312
            |.|::.:|.|.|||||:||||||:|.||         |....:|. |..:||:|.::
 Worm   192 RSELSAQLMLDEKQVKVWFQNRRMKDKK---------LRQRHSGPFPHGAPVTPCIE 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	27/55 (49%)
nob-1	NP_001369824.1	Homeodomain	163..219	CDD:459649	27/55 (49%)