Protein Alignment ind and ceh-13

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_498655.1
• Gene: ceh-13 / 176069
• WormBaseID: WBGene00000437
• Length: 202
• Species: Caenorhabditis elegans
• Alignment Length: 221
• Identity: 70/221 - (31%)
• Similarity: 96/221 - (43%)
• Gaps: 49/221 - (22%)

  Fly    95 HPHVSSSPGSLYHPYAQLFASKRKSSGFSNY---EGCYPSPPLSANPNSQQLPPIHNLYGSPVVG 156
            :|.|.||...|.|..|.::|:..     |||   .| :.|||.:|:
 Worm    25 YPSVPSSYSPLNHHPADIWAAHP-----SNYIMGNG-HVSPPATAS------------------- 64

  Fly   157 GLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLIN 221
            ||..|      .|.|::|||.|.......:....::.|.......::|.|.
 Worm    65 GLSPP------ASRSSNSSAELPTGVTASQHNTYKWMHTKRSQRPAAPKKK-------------- 109

  Fly   222 DYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGG 286
             ..|.:...||.||:.||.|||:||....|::|.||.|||:.|:|.|.||||||||||:|:||..
 Worm   110 -VIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKRE 173

  Fly   287 SESPTFNLSTNSNGSPQASPVSPQVK 312
            .|......:|..:.||.:|.....||
 Worm   174 KEKAFLARNTWESNSPTSSCSGEDVK 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	32/55 (58%)
ceh-13	NP_498655.1	Homeodomain	118..164	CDD:459649	27/45 (60%)