Protein Alignment ind and Hoxd8

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_032302.2
• Gene: Hoxd8 / 15437
• MGIID: 96209
• Length: 289
• Species: Mus musculus
• Alignment Length: 298
• Identity: 88/298 - (29%)
• Similarity: 115/298 - (38%)
• Gaps: 96/298 - (32%)

  Fly    79 AAAAAAAAAA---------------------AAALQ---------------QHPHVSSSPG---- 103
            ||||||||||                     |||||               .|||.|..||
Mouse    19 AAAAAAAAAAGEAINPTYYDCHFAPEVSGRHAAALQLYGNSAAGFPHAHPHPHPHPSPPPGCGGG 83

  Fly   104 -------SLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPL- 160
                   ..:|..|        .|..:.|:.. |.||....|     ||      .|..||:..
Mouse    84 GGPGPGQDYFHAGA--------GSPTAAYQAA-PPPPHPPPP-----PP------PPPCGGIACH 128

  Fly   161 PEPGSFCTSPSASSSASLDYTNNFDEP-----QGKRFKHESSCSPNS-----SPLKNHSSGGPVE 215
            .||..|           ..|.|...:|     |.........|..:|     .|...:.|..|.:
Mouse   129 GEPAKF-----------YGYDNLQRQPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQ 182

  Fly   216 ITPLIN-DYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRR 279
            :.|.:. ..|...:|.|..::..|.||||:||..|.||:|.||||:::.|.|:|:||||||||||
Mouse   183 MFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRR 247

  Fly   280 VKQKKGGSESPTFNLSTNSNGSPQASPVSPQVKVHELK 317
            :|.||..::. .|..|     .|:|....|:.:|..|:
Mouse   248 MKWKKENNKD-KFPAS-----RPEAKDGDPKKEVSGLE 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	30/51 (59%)
Hoxd8	NP_032302.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	62..125		18/82 (22%)
		COG5576	139..272	CDD:227863	47/138 (34%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	162..184		4/21 (19%)
		Antp-type hexapeptide	183..188		1/4 (25%)
		Homeobox	199..251	CDD:278475	30/51 (59%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	252..289		8/34 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900