Protein Alignment ind and Hoxd4

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_034599.2
• Gene: Hoxd4 / 15436
• MGIID: 96208
• Length: 250
• Species: Mus musculus
• Alignment Length: 248
• Identity: 81/248 - (32%)
• Similarity: 107/248 - (43%)
• Gaps: 67/248 - (27%)

  Fly   103 GSLYHPYAQLFASKRKSSGFSNYEGCYPSP-------------PLSANP---NSQQLPPIHNLYG 151
            |.|....|..:.|..:.:.|.. .|.||.|             |.||.|   :.|:.....:.||
Mouse    27 GYLGEQGADYYGSGAQGADFQP-SGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYG 90

  Fly   152 SP---VVGGLPLPEPGS-FCTSPSASSSASLDYTNNFDEPQGKRFK------------HESSCSP 200
            :|   .....|.|.||: .|:.|          |.....|.|...|            |.:|.:|
Mouse    91 APGERCPAPPPAPLPGARACSQP----------TGPKQPPPGTALKQPAVVYPWMKKVHVNSVNP 145

  Fly   201 NSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLR 265
                  |::.|.|              ||.|||:|..|:||||:||..|.||:|.||||||:.|.
Mouse   146 ------NYTGGEP--------------KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 190

  Fly   266 LSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNG-SPQASP---VSPQVKVH 314
            |||:|:||||||||:|.||......|...|::|:. |..|:|   :.|..|.|
Mouse   191 LSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSCSSSAAPGQHLQPMAKDH 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	35/51 (69%)
Hoxd4	NP_034599.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..126		24/105 (23%)
		Antp-type hexapeptide	131..136		0/4 (0%)
		Homeobox	155..208	CDD:278475	35/52 (67%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..250		9/34 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810