Protein Alignment ind and Hoxd11

DIOPT Version :10

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_032299.1
• Gene: Hoxd11 / 15431
• MGIID: 96203
• Length: 336
• Species: Mus musculus
• Alignment Length: 292
• Identity: 84/292 - (28%)
• Similarity: 112/292 - (38%)
• Gaps: 91/292 - (31%)

  Fly    25 GSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAA 89
            |.|||....:...|           ||                          :|||||||||||
Mouse    89 GGPGGGGGGSGGYA-----------PY--------------------------YAAAAAAAAAAA 116

  Fly    90 AA-------------------LQQHPH-VSSSPGSLYHPYAQLFASKRKSS---------GFSNY 125
            ||                   |.:.|. |..:||..:.|.|.  ||...|:         ||..:
Mouse   117 AAEEAAMQRDLLPPAGRRPDVLFKAPEPVCGAPGPPHGPAAA--ASNFYSAVGRNGILPQGFDQF 179

  Fly   126 EGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK 190
            ....|.||. |.|..|..|......|:...|. |.|..|....||.|.::..       .||:|.
Mouse   180 YEAAPGPPF-AGPQPQPAPAPPQPEGAADKGD-PKPGAGGGGGSPCAKATPG-------PEPKGA 235

  Fly   191 RFKHESSCSPNSSP---LKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYL 252
            .   |........|   .....|||.|.        ...|::.|..:|..|:.||||||..|.|:
Mouse   236 A---EGGGGEGEGPPGEAGAEKSGGTVA--------PQRSRKKRCPYTKYQIRELEREFFFNVYI 289

  Fly   253 SRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK 284
            ::.:|::::..|.|:::||||||||||:|:||
Mouse   290 NKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	25/55 (45%)
Hoxd11	NP_032299.1	DUF3528	26..187	CDD:432284	33/136 (24%)
		Homeodomain	265..321	CDD:459649	25/55 (45%)