Protein Alignment ind and Hoxd1

DIOPT Version :9

• Sequence 1: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: NP_034597.2
• Gene: Hoxd1 / 15429
• MGIID: 96201
• Length: 328
• Species: Mus musculus
• Alignment Length: 341
• Identity: 95/341 - (27%)
• Similarity: 132/341 - (38%)
• Gaps: 95/341 - (27%)

  Fly    14 RPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPM------LPYPAS--YV-----GSYLFSLGI 65
            ||...|....|||..|:..:...:|.|...||.|.      :|.||:  |.     |:|
Mouse    36 RPVALQPAFPLGSGDGAFVSCLPLATARPTPSPPAGPAQSPVPQPAAPRYAPCTLEGAY------ 94

  Fly    66 QQQQQQQQQQQQHAAAAAAA---------------AAAAAALQQHPHVSSSPGSLYHPYAQLFAS 115
                      ::.||.|:||               |...||.:...||..:..:::........|
Mouse    95 ----------ERGAAPASAAEYGFLGSGPAFDFPGALGRAADEGGAHVHYATSAVFSGGGSFLLS 149

  Fly   116 KRKSSGFSNYEGCYPS---PPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSAS 177
            .:.........|.:|:   .|...:|.     |...:  ||..|..|.|      .||::|..|:
Mouse   150 GQVDFAAFGEPGPFPACLKEPADGHPG-----PFQTV--SPAPGACPKP------ASPTSSLPAA 201

  Fly   178 LDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLEL 242
               .:.|:..:.||      .:|..|.|..:.:..|             ...|||.|::.||.||
Mouse   202 ---HSTFEWMKVKR------NAPKKSKLSEYGATSP-------------PSAIRTNFSTKQLTEL 244

  Fly   243 EREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSES-------------PTFNL 294
            |:||..|.||:|.|||||||.|:|::.||||||||||:||||...|.             |....
Mouse   245 EKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVASIKLPRSET 309

  Fly   295 STNSNGSPQASPVSPQ 310
            |...:|....||...|
Mouse   310 SPIKSGRNLGSPSQAQ 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ind	NP_996087.2	Homeobox	231..283	CDD:278475	34/51 (67%)
Hoxd1	NP_034597.2	PRK04233	59..>105	CDD:305134	15/61 (25%)
		Antp-type hexapeptide	204..209		1/4 (25%)
		Homeobox	233..285	CDD:278475	34/51 (67%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	304..328		6/22 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810